Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885890.1_cds_XP_016439999.1_35501
CDS Infomation

[gene=LOC107765812] [db_xref=GeneID:107765812] [protein=heat stress transcription factor A-1b-like] [protein_id=XP_016439999.1] [location=join(4906..5130,6746..8014)] [gbkey=CDS]
Sequence

ATGGACGGAGTTCATGAGACCACGGCGGTAGGGAATTCGCCGCCGCCGTTTCTGAGCAAG
ACGTATGACATGGTTGATGATCCGTCGACGGATTCTGTGGTGTCGTGGAGTAAGAGTCAC
AACAGCTTTGTTGTGTGGAACGTGCCGGAGTTTGCTAGAGATGTTTTGCCCAAGTATTTC
AAGCACAATAACTTCTCCAGCTTCGTCAGACAGTTGAATACTTACGGTTTCAGGAAGGTT
GATCCGGATCGCTGGGAATTTGCAAACGAGGGATTTCTTAGAGGCCACAAACACCTGTTG
AAGAGTATAAGCAGGCGAAAACCCTCTCAGGTGCAGGGCCATCAGCAAACCACCTCCCAA
GTGCAAAATGCATCTGTTGGATCTTGTGTTGAAGTTGGGAAGTTCGGAATAGAGGATGAG
GTGGAAAGGCTTAAAAGAGATAAGGATGTTCTTATGCAGGAGCTGGTTAAGTTGAAACAG
CAGCAGCAGGCGACGGATCACCAAATGCAGACTGTTGGGCAGCGTGTCCAATTAATGGAG
AAAAGGCAACAGCAAATGATGTCATTCCTTGCCAAGGCCATGCAGAGCCCTGGCTTTGTA
GCCCAACTGGTACATCAACAGAATGGGAGTAACAGGCGTATTGCTGGAATGAATAAGAAA
AGGAGACTTCCTGACCAGGATGAAGAAAATGTTGCGGGCAGTCCTGTTAATATGTTGCAA
GATGGACGGATAGTCAGGTATCAACCTTCAATGAACGAGGCAGCAAAAGCATTGCTGCGG
CAGATTCTGAAAATAAATACACCTGGGAGGCTGGACAACAGACTTAAGAATACAAATGGT
CTTTTGACTGATAATCCCCTCTCTCCCAAGAACGCACTTAGTGGTGATACATCCAGTCGT
ATTTCTGGGGTTACCCTCTCTGAAGTATTGCCAATGTCTTCACAGTCTCATATAACCTCA
GATTCAGGATTTCCATTCAACTCTTGTTCATCTGTCATGTCTGAGAGCCAATCTTCAACT
ACTGTTGTTCCTGGGGAGGCCAAAGTTCCTAAGTTACCTGAAACGGATGCTCTGAACTCT
CTCACAGACCATGATTTGCCTAAATTTTCTCAAGAACAAATGATTAATAGACAGGAAACT
TTTGGAATAACTGGCCTCAAGAGGCATGAGACTGGAAATGTGCCATATATTGACAACACG
CAAGCCATTTTGGATGGTGTAACAGCAATTGCTCCTGATGGATTTTTGGCAGACACCCAT
GTCGATGTCCTGCTTGATGATGTGCCTAAGCTTCCAGCGATTAATGATATTTTCTGGGAC
CAGATTCTTTCTGCAAGCCCTCTTACTGGGGATACGGATGAAATTGGTATGGAAGATGGC
TTTGAAAAGGAAGAGGATTTTCTAGGAGTTGAGGAGAATGATTTGGATAAACTGAACCAT
ATGTGTCATCTTACTGAACAGATGGGGCTTCTTTCATCAGCAGCTCAGATTTGA

Peptide Sequence

PEP ID

XP_016439999.1
PEP Infomation

PREDICTED: heat stress transcription factor A-1b-like [Nicotiana tabacum]
Sequence

MDGVHETTAVGNSPPPFLSKTYDMVDDPSTDSVVSWSKSHNSFVVWNVPEFARDVLPKYF
KHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGHKHLLKSISRRKPSQVQGHQQTTSQ
VQNASVGSCVEVGKFGIEDEVERLKRDKDVLMQELVKLKQQQQATDHQMQTVGQRVQLME
KRQQQMMSFLAKAMQSPGFVAQLVHQQNGSNRRIAGMNKKRRLPDQDEENVAGSPVNMLQ
DGRIVRYQPSMNEAAKALLRQILKINTPGRLDNRLKNTNGLLTDNPLSPKNALSGDTSSR
ISGVTLSEVLPMSSQSHITSDSGFPFNSCSSVMSESQSSTTVVPGEAKVPKLPETDALNS
LTDHDLPKFSQEQMINRQETFGITGLKRHETGNVPYIDNTQAILDGVTAIAPDGFLADTH
VDVLLDDVPKLPAINDIFWDQILSASPLTGDTDEIGMEDGFEKEEDFLGVEENDLDKLNH
MCHLTEQMGLLSSAAQI

Transcript Sequence

Gene sequence data has not been registered.